Top San Juan Boat Tours

Q: Which San Juan Boat Tours have Instant Confirmation?

San Juan Boat Tours with Instant Confirmation include: Deep Sea Fishing Private Boat Charter in San Juan Private El Yunque Rainforest Day Tour with Transport Sail Away: Private Scenic Excursion from San Juan Private Snorkeling, Sunset & Bioluminiscent Bay Swim Boat Tour Private San Juan Bay Boat Sunset-Night Cruise View all Tours with Instant Confirmation →

Q: I need a ride! Which San Juan Boat Tours have Hotel Pickup?

No problem. These San Juan Boat Tours include Hotel Pickup: Private El Yunque Rainforest Day Tour with Transport Half Day Icacos Island with Roundtrip Transport from San Juan "San Juan: La Parguera Bio Bay Swim & Rum Tasting" Vieques Bio Bay Tour and Beach Day Trip from San Juan by Ferry Full-Day Tinajas Hiking to El Yunque Rainforest with Transport View all Tours with Hotel Pickup →

Q: Got any more San Juan trip ideas?

We sure do. Check out our curated lists of hand-picked San Juan Tours. Top 10 San Juan 2026 Senior-friendly tours San Juan The best tours and activities for culture lovers in San Juan Top Day Trips from San Juan Things to do in San Juan this summer View all San Juan Trip Ideas →

Q: What are the most popular styles of Tours and Activities in San Juan?

Based on our sales data over the past year, the most popular styles of tours and activities in San Juan are: San Juan Luxury & Special Occasions San Juan Luxury Tours San Juan Tours & Sightseeing San Juan Outdoor Activities San Juan Bus & Minivan Tours View all tour styles in San Juan →

Deep Sea Fishing Private Boat Charter in San Juan

Experience some of the greatest sport fishing waters in the world when you take a full day or half day fishing charter from San Juan, …More

4.6 (10)

Deep Sea Fishing Private Boat Charter in San Juan

Experience some of the greatest sport fishing waters in the world when you take a full day or half day fishing charter from San Juan,...

4 hours Free Cancellation

4.6 (10)

from
$1,282

Private El Yunque Rainforest Day Tour with Transport

This experience is the same El Yunque experience you know and love, but this time fully private! Our certified guides go above and beyond to …More

5.0 (34)

Private El Yunque Rainforest Day Tour with Transport

This experience is the same El Yunque experience you know and love, but this time fully private! Our certified guides go above and beyond to...

4 to 6 hours Hotel pickup offered Free Cancellation

5.0 (34)

from
$595

Sail Away: Private Scenic Excursion from San Juan

Private, AM. PM. or Sunset, sailing around the San Juan Bay and Harbor of Old San Juan, Puerto Rico. (Prices already include all taxes and fees) …More

4.9 (164)

Sail Away: Private Scenic Excursion from San Juan

Private, AM. PM. or Sunset, sailing around the San Juan Bay and Harbor of Old San Juan, Puerto Rico. (Prices already include all taxes and fees)...

2 to 3 hours Free Cancellation

4.9 (164)

from
$494

Private Snorkeling, Sunset & Bioluminiscent Bay Swim Boat Tour

Mystic Waters Under the Sun & Stars is the most intimate and cinematic way to interact with nature, an experience unlike any other in Puerto …More

4.9 (52)

Private Snorkeling, Sunset & Bioluminiscent Bay Swim Boat Tour

Mystic Waters Under the Sun & Stars is the most intimate and cinematic way to interact with nature, an experience unlike any other in Puerto...

9 hours Free Cancellation

4.9 (52)

from
$400

Private San Juan Bay Boat Sunset-Night Cruise

Enjoy an unforgettable experience in our unique private boat ride at the bay of San Juan. You will have the opportunity to know some history …More

5.0 (81)

Private San Juan Bay Boat Sunset-Night Cruise

Enjoy an unforgettable experience in our unique private boat ride at the bay of San Juan. You will have the opportunity to know some history...

1 hour 30 minutes Free Cancellation

5.0 (81)

from
$389

Half Day Icacos Island with Roundtrip Transport from San Juan

Embark on the ultimate tropical escape with our 4-Hour Snorkeling and Beach Tour to Icacos Island! This Half-day adventure takes you to the pristine shores …More

Isla Verde, Puerto Rico

4.9 (41)

Half Day Icacos Island with Roundtrip Transport from San Juan

Embark on the ultimate tropical escape with our 4-Hour Snorkeling and Beach Tour to Icacos Island! This Half-day adventure takes you to the pristine shores...

6 hours Hotel pickup offered Free Cancellation

4.9 (41)

from
$289

San Juan Puerto Rico Mini Boats Adventure

Your tour will depart from the San Juan Bay Marina after a brief safety orientation. You'll take the helm of a 13′ rigid inflatable boat, …More

5.0 (1)

San Juan Puerto Rico Mini Boats Adventure

Your tour will depart from the San Juan Bay Marina after a brief safety orientation. You'll take the helm of a 13′ rigid inflatable boat,...

1 hour 30 minutes Free Cancellation

5.0 (1)

from
$289

"San Juan: La Parguera Bio Bay Swim & Rum Tasting"

Embark on a magical journey from San Juan to La Parguera and discover one of Puerto Rico's breathtaking bioluminescent bays! This 10-hour all-inclusive adventure begins …More

Isla Verde, Puerto Rico

4.8 (144)

"San Juan: La Parguera Bio Bay Swim & Rum Tasting"

Embark on a magical journey from San Juan to La Parguera and discover one of Puerto Rico's breathtaking bioluminescent bays! This 10-hour all-inclusive adventure begins...

9 hours Hotel pickup offered Free Cancellation

4.8 (144)

from
$250

Vieques Bio Bay Tour and Beach Day Trip from San Juan by Ferry

Experience the Brightest bioluminescent bay on the World! (Guinness World Records Certified) Join us on the only same day Vieques Bio Bay + Beach Day …More

Luquillo, Puerto Rico

4.8 (214)

Vieques Bio Bay Tour and Beach Day Trip from San Juan by Ferry

Experience the Brightest bioluminescent bay on the World! (Guinness World Records Certified) Join us on the only same day Vieques Bio Bay + Beach Day...

11 hours Hotel pickup offered Free Cancellation

4.8 (214)

from
$230

Full-Day Tinajas Hiking to El Yunque Rainforest with Transport

Connect with nature and get a dose of fresh air in this 7-hour tour to Las Tinajas in Ceiba, Puerto Rico. the clear trails make …More

4.9 (64)

Full-Day Tinajas Hiking to El Yunque Rainforest with Transport

Connect with nature and get a dose of fresh air in this 7-hour tour to Las Tinajas in Ceiba, Puerto Rico. the clear trails make...

7 hours Hotel pickup offered Free Cancellation

4.9 (64)

from
$200

Icacos Island Luxury Sailing Catamaran All Inclusive Tour

Escape the ordinary and experience the ultimate in luxury and fun aboard Getaway Too, our 54-foot catamaran designed for an intimate and personalized adventure. Unlike …More

4.9 (160)

Icacos Island Luxury Sailing Catamaran All Inclusive Tour

Escape the ordinary and experience the ultimate in luxury and fun aboard Getaway Too, our 54-foot catamaran designed for an intimate and personalized adventure. Unlike...

6 hours Free Cancellation

4.9 (160)

from
$195

Two-in-One Day Trip: El Yunque and Bio Bay Tour with Transport

Get ready to experience two of Puerto Rico’s most amazing natural attractions in one unforgettable day! This full-day package covers the best of the East …More

Isla Verde, Puerto Rico

4.9 (1,430)

Two-in-One Day Trip: El Yunque and Bio Bay Tour with Transport

Get ready to experience two of Puerto Rico’s most amazing natural attractions in one unforgettable day! This full-day package covers the best of the East...

12 hours Hotel pickup offered Free Cancellation

4.9 (1,430)

from
$184

Culebra Snorkeling Tour by Catamaran from Fajardo

Let a high-speed catamaran zoom you to one of the 10 top beaches in the Caribbean! This day trip from Fajardo takes you across pristine …More

4.7 (2,580)

Culebra Snorkeling Tour by Catamaran from Fajardo

Let a high-speed catamaran zoom you to one of the 10 top beaches in the Caribbean! This day trip from Fajardo takes you across pristine...

6 hours Free Cancellation

4.7 (2,580)

from
$180

Hike El Yunque Rainforest and Kayak Bio Bay Combo Tour

Please read carefully for all safety requirements and limitations for this tour before booking. This is a moderate to strenuous activity that may not be …More

4.7 (975)

Hike El Yunque Rainforest and Kayak Bio Bay Combo Tour

Please read carefully for all safety requirements and limitations for this tour before booking. This is a moderate to strenuous activity that may not be...

12 hours Hotel pickup offered Free Cancellation

4.7 (975)

from
$180

Our most complete tour for those explorers who would like a glimpse into San Juan's captivating history, have an adventure in the waters of the …More

4.8 (223)

San Juan Mini Boat Tour

Our most complete tour for those explorers who would like a glimpse into San Juan's captivating history, have an adventure in the waters of the...

1 hour 30 minutes Free Cancellation

4.8 (223)

from
$175

Combo El Yunque and Snorkeling Small-Group Tour from San Juan

Immerse yourself in an unforgettable adventure with our El Yunque rainforest and Puerto Rico Caribbean San Juan snorkeling combo tour! Delve into the lush wonders …More

Isla Verde, Puerto Rico

4.7 (10)

Combo El Yunque and Snorkeling Small-Group Tour from San Juan

Immerse yourself in an unforgettable adventure with our El Yunque rainforest and Puerto Rico Caribbean San Juan snorkeling combo tour! Delve into the lush wonders...

8 hours Hotel pickup offered Free Cancellation

4.7 (10)

from
$175

Jet Ski Tour through San Juan Bay (21 years old to rent)

*Scenic Views: Participants can enjoy breathtaking views of the historic San Juan skyline, including colorful buildings, forts, and the coastline. *Historical Significance: The bay is …More

4.9 (730)

Jet Ski Tour through San Juan Bay (21 years old to rent)

*Scenic Views: Participants can enjoy breathtaking views of the historic San Juan skyline, including colorful buildings, forts, and the coastline. *Historical Significance: The bay is...

1 hour 20 minutes Free Cancellation

4.9 (730)

from
$169

San Juan Bay Private Tour with Drinks and Tapas: 4+ people

Get more time, See more do more!, More Space! Welcome aboard your private water tour aboard a choice between a 37 foot sailboat ot a …More

5.0 (51)

San Juan Bay Private Tour with Drinks and Tapas: 4+ people

Get more time, See more do more!, More Space! Welcome aboard your private water tour aboard a choice between a 37 foot sailboat ot a...

3 hours Free Cancellation

5.0 (51)

from
$166

Utuado Canyon, River & Waterfall Adventure in Puerto Rico

Enjoy a unique full-day experience and immerse yourself into the lushness of the central mountain region of the island. Prepare for a scenic drive through …More

5.0 (64)

Utuado Canyon, River & Waterfall Adventure in Puerto Rico

Enjoy a unique full-day experience and immerse yourself into the lushness of the central mountain region of the island. Prepare for a scenic drive through...

8 to 9 hours Hotel pickup offered Free Cancellation

5.0 (64)

from
$165

Trio Tour: El Yunque, Luquillo Beach, and Bio Bay Night Kayaking

Blend a little excitement to your vacation with our Rainforest River – Luquillo Beach & Bio Bay Night Kayaking Trio! This adventure is a full-day …More

Luquillo, Puerto Rico

4.5 (37)